Package index • DATRASextra

All functions

add_numbers_at_length(): Add numbers-at-length to a DATRAS object
add_species_info(): Add species information to CA and HL tables
add_swept_area(): Add swept-area estimates to a datras_raw object
add_swept_area_fishglob(): Add swept-area estimates following the FishGlob workflow
add_swept_area_simple(): Add simple swept-area estimates to a datras_raw object
add_total_numbers_by_haul(): Add total numbers by haul to a DATRAS object
add_total_weight_by_haul(): Add total haul biomass to HH
add_total_weight_by_haul_fishglob(): Add weight estimates to HL records following the FishGlob workflow
add_weight_at_length(): Add weight-at-length estimates to a datras_raw object
as_fishglob(): Convert a datras_raw object to FishGlob format
as_long_format(): Convert a datras_raw object to a long-format table
as_table(): Format a datras_raw object as a table
as_wide_format(): Convert a datras_raw object to a wide-format table
check_lengths(): Check and summarize length distributions in a datras_raw object
check_outliers(): Check outliers in a datras_raw object
check_weights(): Check and summarize individual weight information in a datras_raw object
clean_datras(): Clean a datras_raw object
clean_fishglob(): Clean a datras_raw object following the FishGlob workflow
correct_species(): Standardize and correct species information in a datras_raw object
dab: Dab survey data (example dataset)
download_datras(): Download ICES DATRAS survey data
get_accuracy_cm(): Get length measurement accuracy in cm
get_aphia(): Get WoRMS AphiaIDs from species names
get_land(): Load dissolved Natural Earth land polygon
get_latin(): Get scientific names from WoRMS AphiaIDs
list_prune_datras_available(): Available columns in a datras_raw object
list_prune_datras_defaults(): Default columns used by prune_datras
list_surveys(): List all surveys in the DATRAS data base
mini: Mini DATRAS survey data (example dataset)
mini_fishglob: Mini DATRAS survey data for fishglob comparison (example dataset)
plot_datras_overview(): Unified DATRAS overview plotting
plot_length_distribution(): Plot catch distribution by length class
plot_species_composition(): Plot species composition by length group
prune_datras(): Prune a datras_raw object to selected columns
prune_fishglob(): Prune a datras_raw object following the FishGlob workflow
read_datras(): Read ICES DATRAS survey data from zipped exchange files
species_info: Species information lookup table
survey_info: Survey information table
survey_info_full_raw: Full survey information table
write_exchange(): Write a datras_raw object to a DATRAS exchange zip file